|
Collembolomics - Orchesella cincta |
| File | Description |
| ocinc_statistics.stats | Orchesella cincta genome and annotation statistics |
| ocinc_annotation.tsv | Orchesella cincta annotation summary |
| ocinc_proteins.fa | Orchesella cincta proteins |
| ocinc_transcripts.fa | Orchesella cincta transcripts |
| ocinc_genome.fa | Orchesella cincta genome |
| ocinc_genes.gff | Orchesella cincta gene annotation |
| ocinc_repeats.gff | Orchesella cincta repeats annotation |
| ocinc_repeats.txt | Orchesella cincta repeats summary |
| ocinc_swissprot.blastout | Orchesella cincta BLAST results (SwissProt DB) |
| ocinc_trembl.blastout | Orchesella cincta BLAST results (TrEMBL DB) |
| ocinc_interpro.tsv | Orchesella cincta InterProScan summary |
| ocinc_interpro.gff3 | Orchesella cincta InterProScan |
| ocinc_mapping_il.bam | Orchesella cincta mapping (Illumina) |
| ocinc_mapping_pb.bam | Orchesella cincta mapping (PacBio) |
| ocinc_variants.vcf | Orchesella cincta variant calling (SNP/INDEL) |
| ocinc_rnaseq_th.bam | Orchesella cincta RNA-seq mapping (TopHat) |
| ocinc_rnaseq_hs.bam | Orchesella cincta RNA-seq mapping (HISAT2) |
| ocinc_est.gff3 | Orchesella cincta Collembase EST mapping |
| ocinc_mapping_em.bam | Orchesella cincta embryo mapping |
| ocinc_cds.fa | Orchesella cincta CDS |